Journal of Plant Biotechnology : eISSN 2384-1397 pISSN 1229-2818

Table. 2.

Table. 2.

Proteins classified as high and low score based on Mascot and BLAST search scores. Proteins with the highest scores were categorized as high score; the second highest scores with significant e-value and identity were categorized as low score. ** rating: High scored pharmaceutical proteins

Spot no. Mascot score Protein name Regulation BLAST Score E-value Identity*
High score
1 40 Inorganic phosphate transporter UR 45.2 1e-05 93%
2 99 Acidic endochitinase UR 560 0.0 100%
3 823 ATP synthase CF1 alpha subunit UR 827 0.0 100%
4 86 Chlorophyll a-b binding protein PB 839 0.0 100%
5 29 F-box/FBD/LRR-repeat protein UR 53.2 3e-07 100%
6 24 Ycf1 (chloroplast) UR 91.8 5e-20 100%
7 20 Myosin-2-like isoform X1 UR 60 2e-09 100%
8 26 F-box protein At1g70590 UR 53.7 3e-07 100%
9 96 Kunitz trypsin protease inhibitor ** UR 389 7e-137 100%
55 Cullin-4 UR 1509 0.0 100%
10 66 Pentatricopeptide repeat-containing UR 985 0.0 100%
49 Disease resistance protein RPS4-like UR 1488 0.0 100%
11 108 Germin-like protein 11 PB 360 9e-125 100%
54 ATP synthase subunit d PB 985 0.0 100%
12 33 Protein trichome birefringence-like PB 1483 0.0 100%
Low score
1 31 F-box/kelch-repeat protein UR 40.9 9e-08 100%
35 IQ-DOMAIN 1-like UR 40.5 3e-04 100%
5 15 Beta-1,3-galatosyltransferase 14 UP 54.5 2e-07 100%
6 20 Retrovirus-related Pol polyproteins from transposon 297 family UR 57.9 1e-08 100%
8 24 Endoribonuclease Dicer homolog ** UR 49.4 5e-06 100%
22 Staphylococcal Nuclease domain-containing protein 1 ** UR 50.3 4e-06 100%
9 64 S locus-linked F box protein UR 723 0.0 100%
53 Leucoanthocyanidin reductase 1 UR 662 0.0 100%
10 60 Germin-like protein 11 UR 360 9e-125 100%
33 Elongation factor G family protein UR 1302 0.0 100%
11 54 Auxin-binding protein ABP19a PB 341 1e-118 100%
51 Autophagy-related protein 8D-like PB 412 2e-145 100%

*The cut-off for query cover is 82% and identity is 75%, however, most of proteins have 100% of these two values. UR: Upregulated; PB: Present in both.

J Plant Biotechnol 2020;47:273-82 https://doi.org/10.5010/JPB.2020.47.4.273
© 2020 J Plant Biotechnol