Journal of Plant Biotechnology : eISSN 2384-1397 pISSN 1229-2818

Table. 1.

Table. 1.

All the identified CYP family members in the tomato plant and their nomenclature, locus name, molecular weight, protein sequence length, chromosomal location, subcellular localization, theoretical isoelectric point, and predicted exons

Gene name Locus name ORF Chromosome location Exon Protein

Length (aa) MW (kDa) pI Domain information CLD position Subcellular localization
SlCYP1 >Solyc12g038110 186 SL4.0ch12:48323666..48323851 1 61 7.169 9.30 SD 2-61 Extracellular
SlCYP2 >Solyc12g089200 228 SL4.0ch12:63881747..63881974 1 75 8.149 5.39 SD 1-75 Nuclear
SlCYP3 >Solyc12g038030 282 SL4.0ch12:48064472..48064862 2 93 10.549 9.12 SD 2-52 Mitochondrial
SlCYP4 >Solyc11g006070 462 SL4.0ch11:904408..904869 1 153 16.489 6.06 SD 1-149 Cytoplasmic
SlCYP5-1 >Solyc08g006090 483 SL4.0ch08:848486..854332 4 160 17.530 7.01 SD 2-153 Cytoplasmic
SlCYP5-2 >Solyc10g054910 519 SL4.0ch10:55122558..55123076 1 172 17.873 8.59 SD 7-170 Cytoplasmic
SlCYP5-3 >Solyc01g111170 516 SL4.0ch01:89876816..89877826 1 171 17.910 8.83 SD 1-164 Cytoplasmic
SlCYP6-1 >Solyc09g010190 495 SL4.0ch09:3614647..3619878 6 164 18.175 8.58 SD 11-162 Cytoplasmic
SlCYP6-2 >Solyc12g038070 477 SL4.0ch12:48149484..48150037 2 158 18.403 6.72 SD 2-74 Nuclear
SlCYP6-3 >Solyc12g038150 498 SL4.0ch12:48601797..48602468 2 165 18.894 4.72 SD 1-97 Nuclear
SlCYP7 >Solyc01g096520 573 SL4.0ch01:79859565..79864679 7 190 20.510 8.42 SD 26-189 Cytoplasmic
SlCYP8-1 >Solyc06g076970 624 SL2.50ch06:47833488..47837300 7 207 22.249 9.19 SD 41-204 Cytoplasmic
SlCYP8-2 >Solyc12g038010 594 SL4.0ch12:48040757..48041494 3 197 22.340 5.17 SD 35-125 Cytoplasmic
SlCYP9-1 >Solyc06g051650 678 SL4.0ch06:32962272..32966959 8 225 24.469 8.91 SD 59-222 Cytoplasmic
SlCYP9-2 >Solyc12g038000 645 SL2.50ch12:49574555..49575486 4 214 24.485 5.15 MD 156-211 Nuclear
SlCYP9-3 >Solyc01g111360 687 SL4.0ch01:89991208..89995745 7 228 24.933 6.65 SD 49-213 Mitochondrial
SlCYP10 >Solyc01g010590 687 SL4.0ch01:5632492..5638269 8 228 25.763 8.68 SD 35-192 Cytoplasmic
SlCYP11-1 >Solyc10g083930 693 SL4.0ch10:62791267..62795709 7 230 26.055 9.30 SD 76-226 Mitochondrial
SlCYP11-2 >Solyc01g009990 747 SL4.0ch01:4610206..4614220 6 248 26.535 9.20 SD 84-244 Chloroplast
SlCYP11-3 >Solyc09g008410 711 SL4.0ch09:1895141..1903823 7 236 26.881 6.76 SD 82-232 Cytoplasmic
SlCYP12 >Solyc07g007110 894 SL4.0ch07:1829661..1833568 2 297 32.380 8.68 SD 89-252 Chloroplast
SlCYP13 >Solyc02g061800 882 SL4.0ch02:31311295..31312755 2 293 33.831 4.76 MD 2-165 Cytoplasmic
SlCYP14 >Solyc03g119860 954 SL4.0ch03:62855114..62856604 2 317 34.575 8.74 SD 97-288 Chloroplast
SlCYP15 >Solyc08g077790 1032 SL4.0ch08:59811302..59816547 5 343 37.275 5.15 MD 167-323 Extracellular
SlCYP16-1 >Solyc02g090480 1086 SL4.0ch02:50052680..50058430 8 362 40.293 5.66 MD 7-172 Cytoplasmic
SlCYP16-2 >Solyc01g108340 1089 SL4.0ch01:87996043..88000791 8 362 40.347 6.05 MD 7-172 Cytoplasmic
SlCYP17 >Solyc12g049430 1149 SL4.0ch12:60709814..60710962 1 382 43.879 5.59 MD 2-164 Nuclear
SlCYP18-1 >Solyc12g013580 1356 SL4.0ch12:4454376..4461071 12 451 49.078 5.95 SD 277-443 Chloroplast
SlCYP18-2 >Solyc02g086910 1356 SL4.0ch02:47512351..47516135 7 451 49.287 5.00 SD 151-308 Chloroplast
SlCYP19 >Solyc08g062700 1479 SL4.0ch08:49890458..49910307 10 492 54.985 8.40 SD 14-168 Nuclear
SlCYP20 >Solyc02g092380 1791 SL4.0ch02:51497813..51503293 11 596 65.980 7.29 MD 260-443 Cytoplasmic
SlCYP21 >Solyc07g066420 1764 SL4.0ch07:67698634..67708435 14 587 68.095 5.87 MD 2-161 Nuclear
SlCYP22 >Solyc11g067090 1869 SL4.0ch11:50864889..50872734 13 622 70.038 6.62 MD 468-619 Cytoplasmic
SlCYP23 >Solyc09g065720 1983 SL4.0ch09:60106675..60114638 13 660 73.006 10.69 SD 10-174 Nuclear
SlCYP24 >Solyc08g067090 2430 SL4.0ch08:54099820..54111045 13 809 91.028 11.59 SD 9-175 Nuclear
J Plant Biotechnol 2022;49:15-29 https://doi.org/10.5010/JPB.2022.49.1.015
© 2022 J Plant Biotechnol