Journal of Plant Biotechnology : eISSN 2384-1397 pISSN 1229-2818

Fig. 2.

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Fig. 2. The relative synonymous codon usage (RSCU) value of each codon in the coat protein (CP) gene of each ApMV isolate is shown. Rows indicate the 59 non-degenerate, non-stop codons. Columns represent the 52 ApMV isolates. Over-represented codons (RSCU > 1) are shown by blue cells and under-represented codons (RSCU < 1) by red cells. Codons were grouped into three main clusters on the basis of RSCU values: under-represented A/U- and G/C-ending codons (cluster I, grey bar), under-represented codons mostly ending in G/C (cluster II, orange bar), and over-represented codons mostly ending in A/U (cluster III, green bar)
J Plant Biotechnol 2022;49:46-60 https://doi.org/10.5010/JPB.2022.49.1.046
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